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Cluster: HRGMv2_4427_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4427_6 HRGMv2_4427_6_32 43570 44364 - 3.A.1.34.1
TC HRGMv2_4427_6 HRGMv2_4427_6_33 44357 45322 - 3.A.1.34.1
pfam HRGMv2_4427_6 HRGMv2_4427_6_34 45341 46327 - ABC_sub_bind
TC HRGMv2_4427_6 HRGMv2_4427_6_35 46396 47445 - 9.A.23.1.1
CAZyme HRGMv2_4427_6 HRGMv2_4427_6_36 47763 50105 - GT35
TC HRGMv2_4427_6 HRGMv2_4427_6_37 50113 50955 - 3.A.1.1.45
TC HRGMv2_4427_6 HRGMv2_4427_6_38 50959 51798 - 3.A.1.1.45
TC HRGMv2_4427_6 HRGMv2_4427_6_39 51808 53151 - 3.A.1.1.45
pfam HRGMv2_4427_6 HRGMv2_4427_6_40 53204 54124 - AP_endonuc_2
TF HRGMv2_4427_6 HRGMv2_4427_6_41 54136 54609 - 0040517
CAZyme HRGMv2_4427_6 HRGMv2_4427_6_42 54781 57825 - GH38
Gene ID: HRGMv2_4427_6_32
Type: TC
Location: 43570 - 44364 (-)
Gene ID: HRGMv2_4427_6_33
Type: TC
Location: 44357 - 45322 (-)
Gene ID: HRGMv2_4427_6_34
Type: pfam
Location: 45341 - 46327 (-)
Gene ID: HRGMv2_4427_6_35
Type: TC
Location: 46396 - 47445 (-)
Gene ID: HRGMv2_4427_6_36
Type: CAZyme
Location: 47763 - 50105 (-)
Gene ID: HRGMv2_4427_6_37
Type: TC
Location: 50113 - 50955 (-)
Gene ID: HRGMv2_4427_6_38
Type: TC
Location: 50959 - 51798 (-)
Gene ID: HRGMv2_4427_6_39
Type: TC
Location: 51808 - 53151 (-)
Gene ID: HRGMv2_4427_6_40
Type: pfam
Location: 53204 - 54124 (-)
Gene ID: HRGMv2_4427_6_41
Type: TF
Location: 54136 - 54609 (-)
Gene ID: HRGMv2_4427_6_42
Type: CAZyme
Location: 54781 - 57825 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
RGIG3926
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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