Cluster: HRGMv2_4427_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4427
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4427_4 | HRGMv2_4427_4_12 | 10213 | 11196 | - | GT8 |
| CAZyme | HRGMv2_4427_4 | HRGMv2_4427_4_13 | 11156 | 12022 | - | GT8 |
| NULL(UNKNOWN) | HRGMv2_4427_4 | HRGMv2_4427_4_14 | 12019 | 12804 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4427_4 | HRGMv2_4427_4_15 | 13019 | 13600 | - | HTH_3 |
| TC | HRGMv2_4427_4 | HRGMv2_4427_4_16 | 13847 | 14722 | + | 2.A.115.1.1 |
| TC | HRGMv2_4427_4 | HRGMv2_4427_4_17 | 14725 | 16089 | - | 2.A.66.1.7 |
Gene ID: HRGMv2_4427_4_12
Type: CAZyme
Location: 10213 - 11196 (-)
Type: CAZyme
Location: 10213 - 11196 (-)
Gene ID: HRGMv2_4427_4_13
Type: CAZyme
Location: 11156 - 12022 (-)
Type: CAZyme
Location: 11156 - 12022 (-)
Gene ID: HRGMv2_4427_4_14
Type:
Location: 12019 - 12804 (-)
Type:
Location: 12019 - 12804 (-)
Gene ID: HRGMv2_4427_4_15
Type: TF
Location: 13019 - 13600 (-)
Type: TF
Location: 13019 - 13600 (-)
Gene ID: HRGMv2_4427_4_16
Type: TC
Location: 13847 - 14722 (+)
Type: TC
Location: 13847 - 14722 (+)
Gene ID: HRGMv2_4427_4_17
Type: TC
Location: 14725 - 16089 (-)
Type: TC
Location: 14725 - 16089 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
RGIG3926
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.