Cluster: HRGMv2_4427_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4427
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4427_3 | HRGMv2_4427_3_32 | 55562 | 56434 | - | 3.A.1.1.29 |
| pfam | HRGMv2_4427_3 | HRGMv2_4427_3_33 | 56445 | 57371 | - | BPD_transp_1 |
| TF | HRGMv2_4427_3 | HRGMv2_4427_3_34 | 57577 | 58983 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4427_3 | HRGMv2_4427_3_35 | 59013 | 60860 | - | GH20 |
Gene ID: HRGMv2_4427_3_32
Type: TC
Location: 55562 - 56434 (-)
Type: TC
Location: 55562 - 56434 (-)
Gene ID: HRGMv2_4427_3_33
Type: pfam
Location: 56445 - 57371 (-)
Type: pfam
Location: 56445 - 57371 (-)
Gene ID: HRGMv2_4427_3_34
Type: TF
Location: 57577 - 58983 (+)
Type: TF
Location: 57577 - 58983 (+)
Gene ID: HRGMv2_4427_3_35
Type: CAZyme
Location: 59013 - 60860 (-)
Type: CAZyme
Location: 59013 - 60860 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
RGIG3926
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.