Cluster: HRGMv2_4427_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4427
- CGC Family ID: CGCFAM_08630
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4427_63 | HRGMv2_4427_63_4 | 1731 | 3875 | + | 9.A.8.1.5 |
| pfam | HRGMv2_4427_63 | HRGMv2_4427_63_5 | 4054 | 4869 | + | Ribosomal_S2 |
| pfam | HRGMv2_4427_63 | HRGMv2_4427_63_6 | 4947 | 5855 | + | EF_TS |
| TC | HRGMv2_4427_63 | HRGMv2_4427_63_7 | 6051 | 7925 | + | 3.A.1.117.3 |
| CAZyme | HRGMv2_4427_63 | HRGMv2_4427_63_8 | 7939 | 9537 | + | GH9 |
Gene ID: HRGMv2_4427_63_4
Type: TC
Location: 1731 - 3875 (+)
Type: TC
Location: 1731 - 3875 (+)
Gene ID: HRGMv2_4427_63_5
Type: pfam
Location: 4054 - 4869 (+)
Type: pfam
Location: 4054 - 4869 (+)
Gene ID: HRGMv2_4427_63_6
Type: pfam
Location: 4947 - 5855 (+)
Type: pfam
Location: 4947 - 5855 (+)
Gene ID: HRGMv2_4427_63_7
Type: TC
Location: 6051 - 7925 (+)
Type: TC
Location: 6051 - 7925 (+)
Gene ID: HRGMv2_4427_63_8
Type: CAZyme
Location: 7939 - 9537 (+)
Type: CAZyme
Location: 7939 - 9537 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
RGIG3926
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.