Cluster: HRGMv2_4427_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4427
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4427_58 | HRGMv2_4427_58_4 | 2589 | 2816 | + | 3.D.1.6.4 |
| pfam | HRGMv2_4427_58 | HRGMv2_4427_58_5 | 2943 | 4115 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| CAZyme | HRGMv2_4427_58 | HRGMv2_4427_58_6 | 4380 | 6620 | - | GH95 |
| pfam | HRGMv2_4427_58 | HRGMv2_4427_58_7 | 6778 | 7950 | + | malic | Malic_M |
| TC | HRGMv2_4427_58 | HRGMv2_4427_58_8 | 8111 | 9649 | - | 2.A.21.2.5 |
Gene ID: HRGMv2_4427_58_4
Type: TC
Location: 2589 - 2816 (+)
Type: TC
Location: 2589 - 2816 (+)
Gene ID: HRGMv2_4427_58_5
Type: pfam
Location: 2943 - 4115 (-)
Type: pfam
Location: 2943 - 4115 (-)
Gene ID: HRGMv2_4427_58_6
Type: CAZyme
Location: 4380 - 6620 (-)
Type: CAZyme
Location: 4380 - 6620 (-)
Gene ID: HRGMv2_4427_58_7
Type: pfam
Location: 6778 - 7950 (+)
Type: pfam
Location: 6778 - 7950 (+)
Gene ID: HRGMv2_4427_58_8
Type: TC
Location: 8111 - 9649 (-)
Type: TC
Location: 8111 - 9649 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
RGIG3926
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.