Cluster: HRGMv2_4427_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4427
- CGC Family ID: CGCFAM_01161
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4427_48 | HRGMv2_4427_48_5 | 2990 | 5122 | - | GH3 |
| pfam | HRGMv2_4427_48 | HRGMv2_4427_48_6 | 5160 | 6041 | - | ABC2_membrane | ABC2_membrane_3 |
| TC | HRGMv2_4427_48 | HRGMv2_4427_48_7 | 6034 | 6966 | - | 3.A.1.105.3 |
Gene ID: HRGMv2_4427_48_5
Type: CAZyme
Location: 2990 - 5122 (-)
Type: CAZyme
Location: 2990 - 5122 (-)
Gene ID: HRGMv2_4427_48_6
Type: pfam
Location: 5160 - 6041 (-)
Type: pfam
Location: 5160 - 6041 (-)
Gene ID: HRGMv2_4427_48_7
Type: TC
Location: 6034 - 6966 (-)
Type: TC
Location: 6034 - 6966 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
RGIG3926
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.