Cluster: HRGMv2_4427_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4427
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4427_44 | HRGMv2_4427_44_3 | 1974 | 3875 | - | CBM48 | GH13_9 |
| pfam | HRGMv2_4427_44 | HRGMv2_4427_44_4 | 4124 | 4291 | + | DUF6472 |
| TC | HRGMv2_4427_44 | HRGMv2_4427_44_5 | 4438 | 5289 | + | 3.A.1.3.2 |
| TC | HRGMv2_4427_44 | HRGMv2_4427_44_6 | 5357 | 6067 | + | 3.A.1.3.20 |
| TC | HRGMv2_4427_44 | HRGMv2_4427_44_7 | 6051 | 6806 | + | 3.A.1.3.15 |
Gene ID: HRGMv2_4427_44_3
Type: CAZyme
Location: 1974 - 3875 (-)
Type: CAZyme
Location: 1974 - 3875 (-)
Gene ID: HRGMv2_4427_44_4
Type: pfam
Location: 4124 - 4291 (+)
Type: pfam
Location: 4124 - 4291 (+)
Gene ID: HRGMv2_4427_44_5
Type: TC
Location: 4438 - 5289 (+)
Type: TC
Location: 4438 - 5289 (+)
Gene ID: HRGMv2_4427_44_6
Type: TC
Location: 5357 - 6067 (+)
Type: TC
Location: 5357 - 6067 (+)
Gene ID: HRGMv2_4427_44_7
Type: TC
Location: 6051 - 6806 (+)
Type: TC
Location: 6051 - 6806 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
RGIG3926
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.