Cluster: HRGMv2_4427_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4427
- CGC Family ID: CGCFAM_00939
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4427_41 | HRGMv2_4427_41_9 | 8825 | 9760 | + | 3.A.1.1.10 |
| TC | HRGMv2_4427_41 | HRGMv2_4427_41_10 | 9773 | 10651 | + | 3.A.1.1.29 |
| pfam | HRGMv2_4427_41 | HRGMv2_4427_41_11 | 10677 | 12227 | + | DUF3502 |
| CAZyme | HRGMv2_4427_41 | HRGMv2_4427_41_12 | 12407 | 14734 | + | GH94 |
Gene ID: HRGMv2_4427_41_9
Type: TC
Location: 8825 - 9760 (+)
Type: TC
Location: 8825 - 9760 (+)
Gene ID: HRGMv2_4427_41_10
Type: TC
Location: 9773 - 10651 (+)
Type: TC
Location: 9773 - 10651 (+)
Gene ID: HRGMv2_4427_41_11
Type: pfam
Location: 10677 - 12227 (+)
Type: pfam
Location: 10677 - 12227 (+)
Gene ID: HRGMv2_4427_41_12
Type: CAZyme
Location: 12407 - 14734 (+)
Type: CAZyme
Location: 12407 - 14734 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
RGIG3926
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.