Cluster: HRGMv2_4427_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4427
- CGC Family ID: CGCFAM_10617
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4427_17 | HRGMv2_4427_17_16 | 19242 | 19847 | + | 3.A.1.17.12 |
| pfam | HRGMv2_4427_17 | HRGMv2_4427_17_17 | 19887 | 20549 | + | PG_binding_1 | Hydrolase_2 | PG_binding_2 |
| CAZyme | HRGMv2_4427_17 | HRGMv2_4427_17_18 | 20596 | 22920 | - | GH3 |
Gene ID: HRGMv2_4427_17_16
Type: TC
Location: 19242 - 19847 (+)
Type: TC
Location: 19242 - 19847 (+)
Gene ID: HRGMv2_4427_17_17
Type: pfam
Location: 19887 - 20549 (+)
Type: pfam
Location: 19887 - 20549 (+)
Gene ID: HRGMv2_4427_17_18
Type: CAZyme
Location: 20596 - 22920 (-)
Type: CAZyme
Location: 20596 - 22920 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
RGIG3926
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.