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Cluster: HRGMv2_4426_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4426_6 HRGMv2_4426_6_37 40372 41697 + GH4
NULL(UNKNOWN) HRGMv2_4426_6 HRGMv2_4426_6_38 41919 42077 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4426_6 HRGMv2_4426_6_39 42429 44657 + GH95
pfam HRGMv2_4426_6 HRGMv2_4426_6_40 45072 45677 + DUF1836
pfam HRGMv2_4426_6 HRGMv2_4426_6_41 45974 46456 + ABC_trans_CmpB
TC HRGMv2_4426_6 HRGMv2_4426_6_42 49970 50941 + 3.A.11.1.4
TC HRGMv2_4426_6 HRGMv2_4426_6_43 50967 51707 + 3.A.1.128.3
pfam HRGMv2_4426_6 HRGMv2_4426_6_44 51704 53365 + ABC_export
pfam HRGMv2_4426_6 HRGMv2_4426_6_45 53553 54830 - ABC2_membrane_3
TC HRGMv2_4426_6 HRGMv2_4426_6_46 54849 55745 - 3.A.1.105.9
TC HRGMv2_4426_6 HRGMv2_4426_6_47 56084 57943 - 3.A.1.5.2
TC HRGMv2_4426_6 HRGMv2_4426_6_48 58031 59023 - 3.A.1.5.20
TC HRGMv2_4426_6 HRGMv2_4426_6_49 59092 60102 - 3.A.1.5.2
TC HRGMv2_4426_6 HRGMv2_4426_6_50 60208 61266 - 3.A.1.5.2
TC HRGMv2_4426_6 HRGMv2_4426_6_51 61282 62538 - 3.A.1.5.2
TC HRGMv2_4426_6 HRGMv2_4426_6_52 62735 65161 + 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_4426_6 HRGMv2_4426_6_53 65161 65514 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_4426_6 HRGMv2_4426_6_54 66025 66243 + HMA
TC HRGMv2_4426_6 HRGMv2_4426_6_55 66267 68132 + 3.A.3.6.10
TF HRGMv2_4426_6 HRGMv2_4426_6_56 68393 68758 + HTH_5
pfam HRGMv2_4426_6 HRGMv2_4426_6_57 69107 69484 + FtsX
CAZyme HRGMv2_4426_6 HRGMv2_4426_6_58 69698 70456 + GT2
Gene ID: HRGMv2_4426_6_37
Type: CAZyme
Location: 40372 - 41697 (+)
Gene ID: HRGMv2_4426_6_38
Type:
Location: 41919 - 42077 (-)
Gene ID: HRGMv2_4426_6_39
Type: CAZyme
Location: 42429 - 44657 (+)
Gene ID: HRGMv2_4426_6_40
Type: pfam
Location: 45072 - 45677 (+)
Gene ID: HRGMv2_4426_6_41
Type: pfam
Location: 45974 - 46456 (+)
Gene ID: HRGMv2_4426_6_42
Type: TC
Location: 49970 - 50941 (+)
Gene ID: HRGMv2_4426_6_43
Type: TC
Location: 50967 - 51707 (+)
Gene ID: HRGMv2_4426_6_44
Type: pfam
Location: 51704 - 53365 (+)
Gene ID: HRGMv2_4426_6_45
Type: pfam
Location: 53553 - 54830 (-)
Gene ID: HRGMv2_4426_6_46
Type: TC
Location: 54849 - 55745 (-)
Gene ID: HRGMv2_4426_6_47
Type: TC
Location: 56084 - 57943 (-)
Gene ID: HRGMv2_4426_6_48
Type: TC
Location: 58031 - 59023 (-)
Gene ID: HRGMv2_4426_6_49
Type: TC
Location: 59092 - 60102 (-)
Gene ID: HRGMv2_4426_6_50
Type: TC
Location: 60208 - 61266 (-)
Gene ID: HRGMv2_4426_6_51
Type: TC
Location: 61282 - 62538 (-)
Gene ID: HRGMv2_4426_6_52
Type: TC
Location: 62735 - 65161 (+)
Gene ID: HRGMv2_4426_6_53
Type:
Location: 65161 - 65514 (+)
Gene ID: HRGMv2_4426_6_54
Type: STP
Location: 66025 - 66243 (+)
Gene ID: HRGMv2_4426_6_55
Type: TC
Location: 66267 - 68132 (+)
Gene ID: HRGMv2_4426_6_56
Type: TF
Location: 68393 - 68758 (+)
Gene ID: HRGMv2_4426_6_57
Type: pfam
Location: 69107 - 69484 (+)
Gene ID: HRGMv2_4426_6_58
Type: CAZyme
Location: 69698 - 70456 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS911
→
Species
UMGS911 sp948467545

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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