Cluster: HRGMv2_4426_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4426
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4426_5 | HRGMv2_4426_5_14 | 13413 | 16475 | - | 3.A.1.122.14 |
| CAZyme | HRGMv2_4426_5 | HRGMv2_4426_5_15 | 16531 | 17343 | - | GT8 |
| pfam | HRGMv2_4426_5 | HRGMv2_4426_5_16 | 17422 | 17964 | - | DUF308 | DUF308 |
| TC | HRGMv2_4426_5 | HRGMv2_4426_5_17 | 17964 | 19793 | - | 3.A.25.2.1 |
| NULL(UNKNOWN) | HRGMv2_4426_5 | HRGMv2_4426_5_18 | 19864 | 20298 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_4426_5 | HRGMv2_4426_5_19 | 20432 | 20974 | - | TetR_N |
| CAZyme | HRGMv2_4426_5 | HRGMv2_4426_5_20 | 21192 | 22430 | + | GT4 |
Gene ID: HRGMv2_4426_5_14
Type: TC
Location: 13413 - 16475 (-)
Type: TC
Location: 13413 - 16475 (-)
Gene ID: HRGMv2_4426_5_15
Type: CAZyme
Location: 16531 - 17343 (-)
Type: CAZyme
Location: 16531 - 17343 (-)
Gene ID: HRGMv2_4426_5_16
Type: pfam
Location: 17422 - 17964 (-)
Type: pfam
Location: 17422 - 17964 (-)
Gene ID: HRGMv2_4426_5_17
Type: TC
Location: 17964 - 19793 (-)
Type: TC
Location: 17964 - 19793 (-)
Gene ID: HRGMv2_4426_5_18
Type:
Location: 19864 - 20298 (-)
Type:
Location: 19864 - 20298 (-)
Gene ID: HRGMv2_4426_5_19
Type: STP
Location: 20432 - 20974 (-)
Type: STP
Location: 20432 - 20974 (-)
Gene ID: HRGMv2_4426_5_20
Type: CAZyme
Location: 21192 - 22430 (+)
Type: CAZyme
Location: 21192 - 22430 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS911
Species
UMGS911 sp948467545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.