Cluster: HRGMv2_4426_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4426
- CGC Family ID: CGCFAM_06691
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4426_4 | HRGMv2_4426_4_71 | 75760 | 76506 | - | 3.A.1.3.20 |
| TC | HRGMv2_4426_4 | HRGMv2_4426_4_72 | 76632 | 77399 | - | 3.A.1.3.20 |
| TC | HRGMv2_4426_4 | HRGMv2_4426_4_73 | 77525 | 78379 | - | 3.A.1.3.20 |
| STP | HRGMv2_4426_4 | HRGMv2_4426_4_74 | 79446 | 80045 | + | HD |
| pfam | HRGMv2_4426_4 | HRGMv2_4426_4_75 | 80259 | 81077 | + | SpoU_methylase | MRM3-like_sub_bind | SpoU_sub_bind_like |
| CAZyme | HRGMv2_4426_4 | HRGMv2_4426_4_76 | 81217 | 82239 | - | GT2 |
Gene ID: HRGMv2_4426_4_71
Type: TC
Location: 75760 - 76506 (-)
Type: TC
Location: 75760 - 76506 (-)
Gene ID: HRGMv2_4426_4_72
Type: TC
Location: 76632 - 77399 (-)
Type: TC
Location: 76632 - 77399 (-)
Gene ID: HRGMv2_4426_4_73
Type: TC
Location: 77525 - 78379 (-)
Type: TC
Location: 77525 - 78379 (-)
Gene ID: HRGMv2_4426_4_74
Type: STP
Location: 79446 - 80045 (+)
Type: STP
Location: 79446 - 80045 (+)
Gene ID: HRGMv2_4426_4_75
Type: pfam
Location: 80259 - 81077 (+)
Type: pfam
Location: 80259 - 81077 (+)
Gene ID: HRGMv2_4426_4_76
Type: CAZyme
Location: 81217 - 82239 (-)
Type: CAZyme
Location: 81217 - 82239 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS911
Species
UMGS911 sp948467545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.