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Cluster: HRGMv2_4426_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4426_13 HRGMv2_4426_13_23 29866 31134 + GT2
TF HRGMv2_4426_13 HRGMv2_4426_13_24 31433 31720 + HTH_AraC
NULL(UNKNOWN) HRGMv2_4426_13 HRGMv2_4426_13_25 31879 32670 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4426_13 HRGMv2_4426_13_26 32660 33358 - 3.A.1.132.6
TF HRGMv2_4426_13 HRGMv2_4426_13_27 33360 33722 - GntR
TC HRGMv2_4426_13 HRGMv2_4426_13_28 34141 34818 + 1.C.113.1.3
STP HRGMv2_4426_13 HRGMv2_4426_13_29 34904 36547 - Peptidase_M23
TC HRGMv2_4426_13 HRGMv2_4426_13_30 36823 38088 - 9.B.146.1.1
Gene ID: HRGMv2_4426_13_23
Type: CAZyme
Location: 29866 - 31134 (+)
Gene ID: HRGMv2_4426_13_24
Type: TF
Location: 31433 - 31720 (+)
Gene ID: HRGMv2_4426_13_25
Type:
Location: 31879 - 32670 (-)
Gene ID: HRGMv2_4426_13_26
Type: TC
Location: 32660 - 33358 (-)
Gene ID: HRGMv2_4426_13_27
Type: TF
Location: 33360 - 33722 (-)
Gene ID: HRGMv2_4426_13_28
Type: TC
Location: 34141 - 34818 (+)
Gene ID: HRGMv2_4426_13_29
Type: STP
Location: 34904 - 36547 (-)
Gene ID: HRGMv2_4426_13_30
Type: TC
Location: 36823 - 38088 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS911
→
Species
UMGS911 sp948467545

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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