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Cluster: HRGMv2_4425_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4425_52 HRGMv2_4425_52_1 171 1019 + CE14
pfam HRGMv2_4425_52 HRGMv2_4425_52_2 1045 2712 + TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
STP HRGMv2_4425_52 HRGMv2_4425_52_3 2714 3220 + ACT
TC HRGMv2_4425_52 HRGMv2_4425_52_4 3681 5234 + 2.A.21.2.4
pfam HRGMv2_4425_52 HRGMv2_4425_52_5 5381 6115 + Pro_isomerase
pfam HRGMv2_4425_52 HRGMv2_4425_52_6 6131 7036 - EamA | EamA
TC HRGMv2_4425_52 HRGMv2_4425_52_7 7039 8388 - 2.A.66.1.32
Gene ID: HRGMv2_4425_52_1
Type: CAZyme
Location: 171 - 1019 (+)
Gene ID: HRGMv2_4425_52_2
Type: pfam
Location: 1045 - 2712 (+)
Gene ID: HRGMv2_4425_52_3
Type: STP
Location: 2714 - 3220 (+)
Gene ID: HRGMv2_4425_52_4
Type: TC
Location: 3681 - 5234 (+)
Gene ID: HRGMv2_4425_52_5
Type: pfam
Location: 5381 - 6115 (+)
Gene ID: HRGMv2_4425_52_6
Type: pfam
Location: 6131 - 7036 (-)
Gene ID: HRGMv2_4425_52_7
Type: TC
Location: 7039 - 8388 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-382
→
Genus
SIG636
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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