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Cluster: HRGMv2_4425_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4425_2 HRGMv2_4425_2_6 9269 10300 + GT2
STP HRGMv2_4425_2 HRGMv2_4425_2_7 10362 10994 - HhH-GPD
pfam HRGMv2_4425_2 HRGMv2_4425_2_8 11002 11541 - DUF4364
TC HRGMv2_4425_2 HRGMv2_4425_2_9 11672 13003 + 3.D.6.1.2
TC HRGMv2_4425_2 HRGMv2_4425_2_10 13000 13986 + 3.D.6.1.2
pfam HRGMv2_4425_2 HRGMv2_4425_2_11 13973 14560 + FMN_bind
TC HRGMv2_4425_2 HRGMv2_4425_2_12 14557 15168 + 3.D.6.1.2
TC HRGMv2_4425_2 HRGMv2_4425_2_13 15165 15782 + 3.D.6.1.2
TC HRGMv2_4425_2 HRGMv2_4425_2_14 15794 16594 + 3.D.6.1.3
Gene ID: HRGMv2_4425_2_6
Type: CAZyme
Location: 9269 - 10300 (+)
Gene ID: HRGMv2_4425_2_7
Type: STP
Location: 10362 - 10994 (-)
Gene ID: HRGMv2_4425_2_8
Type: pfam
Location: 11002 - 11541 (-)
Gene ID: HRGMv2_4425_2_9
Type: TC
Location: 11672 - 13003 (+)
Gene ID: HRGMv2_4425_2_10
Type: TC
Location: 13000 - 13986 (+)
Gene ID: HRGMv2_4425_2_11
Type: pfam
Location: 13973 - 14560 (+)
Gene ID: HRGMv2_4425_2_12
Type: TC
Location: 14557 - 15168 (+)
Gene ID: HRGMv2_4425_2_13
Type: TC
Location: 15165 - 15782 (+)
Gene ID: HRGMv2_4425_2_14
Type: TC
Location: 15794 - 16594 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-382
→
Genus
SIG636
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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