Cluster: HRGMv2_4424_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4424
- CGC Family ID: CGCFAM_02263
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4424_26 | HRGMv2_4424_26_13 | 15270 | 16883 | - | GH26 |
| TC | HRGMv2_4424_26 | HRGMv2_4424_26_14 | 16880 | 17440 | - | 3.A.1.25.5 |
| pfam | HRGMv2_4424_26 | HRGMv2_4424_26_15 | 17548 | 17988 | - | Acetyltransf_1 | Acetyltransf_10 |
| TC | HRGMv2_4424_26 | HRGMv2_4424_26_16 | 18087 | 19274 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_4424_26_13
Type: CAZyme
Location: 15270 - 16883 (-)
Type: CAZyme
Location: 15270 - 16883 (-)
Gene ID: HRGMv2_4424_26_14
Type: TC
Location: 16880 - 17440 (-)
Type: TC
Location: 16880 - 17440 (-)
Gene ID: HRGMv2_4424_26_15
Type: pfam
Location: 17548 - 17988 (-)
Type: pfam
Location: 17548 - 17988 (-)
Gene ID: HRGMv2_4424_26_16
Type: TC
Location: 18087 - 19274 (-)
Type: TC
Location: 18087 - 19274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp937942105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.