Cluster: HRGMv2_4424_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4424
- CGC Family ID: CGCFAM_10170
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4424_19 | HRGMv2_4424_19_15 | 15786 | 16895 | + | GH115 |
| pfam | HRGMv2_4424_19 | HRGMv2_4424_19_16 | 17159 | 18394 | - | Oxidored_nitro |
| pfam | HRGMv2_4424_19 | HRGMv2_4424_19_17 | 18391 | 19728 | - | Oxidored_nitro |
| TC | HRGMv2_4424_19 | HRGMv2_4424_19_18 | 19776 | 20576 | - | 3.A.1.14.7 |
| TC | HRGMv2_4424_19 | HRGMv2_4424_19_19 | 20566 | 21492 | - | 3.A.1.14.10 |
Gene ID: HRGMv2_4424_19_15
Type: CAZyme
Location: 15786 - 16895 (+)
Type: CAZyme
Location: 15786 - 16895 (+)
Gene ID: HRGMv2_4424_19_16
Type: pfam
Location: 17159 - 18394 (-)
Type: pfam
Location: 17159 - 18394 (-)
Gene ID: HRGMv2_4424_19_17
Type: pfam
Location: 18391 - 19728 (-)
Type: pfam
Location: 18391 - 19728 (-)
Gene ID: HRGMv2_4424_19_18
Type: TC
Location: 19776 - 20576 (-)
Type: TC
Location: 19776 - 20576 (-)
Gene ID: HRGMv2_4424_19_19
Type: TC
Location: 20566 - 21492 (-)
Type: TC
Location: 20566 - 21492 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp937942105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.