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Cluster: HRGMv2_4424_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4424_15 HRGMv2_4424_15_7 5344 6369 + 9.A.11.1.1
TC HRGMv2_4424_15 HRGMv2_4424_15_8 6383 6745 + 9.A.11.1.1
pfam HRGMv2_4424_15 HRGMv2_4424_15_9 6796 7206 - dCMP_cyt_deam_1
NULL(UNKNOWN) HRGMv2_4424_15 HRGMv2_4424_15_10 7228 7422 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4424_15 HRGMv2_4424_15_11 7494 9890 - GH94
CAZyme HRGMv2_4424_15 HRGMv2_4424_15_12 10235 10888 - GH25
TC HRGMv2_4424_15 HRGMv2_4424_15_13 10872 11312 - 1.E.19.1.5
pfam HRGMv2_4424_15 HRGMv2_4424_15_14 11372 12889 - BppU_N
CAZyme HRGMv2_4424_15 HRGMv2_4424_15_15 13192 14709 - CBM6 | GH43_29
Gene ID: HRGMv2_4424_15_7
Type: TC
Location: 5344 - 6369 (+)
Gene ID: HRGMv2_4424_15_8
Type: TC
Location: 6383 - 6745 (+)
Gene ID: HRGMv2_4424_15_9
Type: pfam
Location: 6796 - 7206 (-)
Gene ID: HRGMv2_4424_15_10
Type:
Location: 7228 - 7422 (-)
Gene ID: HRGMv2_4424_15_11
Type: CAZyme
Location: 7494 - 9890 (-)
Gene ID: HRGMv2_4424_15_12
Type: CAZyme
Location: 10235 - 10888 (-)
Gene ID: HRGMv2_4424_15_13
Type: TC
Location: 10872 - 11312 (-)
Gene ID: HRGMv2_4424_15_14
Type: pfam
Location: 11372 - 12889 (-)
Gene ID: HRGMv2_4424_15_15
Type: CAZyme
Location: 13192 - 14709 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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