Cluster: HRGMv2_4424_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4424
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4424_13 | HRGMv2_4424_13_10 | 9404 | 9994 | + | 4.F.1.1.7 |
| TC | HRGMv2_4424_13 | HRGMv2_4424_13_11 | 10032 | 11627 | + | 2.A.1.15.16 |
| pfam | HRGMv2_4424_13 | HRGMv2_4424_13_12 | 11647 | 12078 | + | Acetyltransf_1 |
| CAZyme | HRGMv2_4424_13 | HRGMv2_4424_13_13 | 12141 | 13775 | - | CBM6 | GH43_16 |
| CAZyme | HRGMv2_4424_13 | HRGMv2_4424_13_14 | 13803 | 14951 | - | GH5_4 |
Gene ID: HRGMv2_4424_13_10
Type: TC
Location: 9404 - 9994 (+)
Type: TC
Location: 9404 - 9994 (+)
Gene ID: HRGMv2_4424_13_11
Type: TC
Location: 10032 - 11627 (+)
Type: TC
Location: 10032 - 11627 (+)
Gene ID: HRGMv2_4424_13_12
Type: pfam
Location: 11647 - 12078 (+)
Type: pfam
Location: 11647 - 12078 (+)
Gene ID: HRGMv2_4424_13_13
Type: CAZyme
Location: 12141 - 13775 (-)
Type: CAZyme
Location: 12141 - 13775 (-)
Gene ID: HRGMv2_4424_13_14
Type: CAZyme
Location: 13803 - 14951 (-)
Type: CAZyme
Location: 13803 - 14951 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp937942105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.