Cluster: HRGMv2_4424_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4424
- CGC Family ID: CGCFAM_10236
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4424_133 | HRGMv2_4424_133_1 | 3 | 1223 | + | 9.A.8.1.9 |
| pfam | HRGMv2_4424_133 | HRGMv2_4424_133_2 | 1236 | 1400 | + | FeoB_associated |
| CAZyme | HRGMv2_4424_133 | HRGMv2_4424_133_3 | 1486 | 3849 | - | CBM35 | GH98 |
| CAZyme | HRGMv2_4424_133 | HRGMv2_4424_133_4 | 3871 | 6141 | - | CBM35 | GH98 |
Gene ID: HRGMv2_4424_133_1
Type: TC
Location: 3 - 1223 (+)
Type: TC
Location: 3 - 1223 (+)
Gene ID: HRGMv2_4424_133_2
Type: pfam
Location: 1236 - 1400 (+)
Type: pfam
Location: 1236 - 1400 (+)
Gene ID: HRGMv2_4424_133_3
Type: CAZyme
Location: 1486 - 3849 (-)
Type: CAZyme
Location: 1486 - 3849 (-)
Gene ID: HRGMv2_4424_133_4
Type: CAZyme
Location: 3871 - 6141 (-)
Type: CAZyme
Location: 3871 - 6141 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp937942105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.