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Cluster: HRGMv2_4424_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4424_66 HRGMv2_4424_66_2 435 1445 + GH26
CAZyme HRGMv2_4424_66 HRGMv2_4424_66_3 1462 3027 + GH32
CAZyme HRGMv2_4424_66 HRGMv2_4424_66_4 3056 3865 - GH1
TC HRGMv2_4424_66 HRGMv2_4424_66_5 3862 4551 - 8.A.49.1.2
TC HRGMv2_4424_66 HRGMv2_4424_66_6 4597 6303 - 2.A.2.3.3
CAZyme HRGMv2_4424_66 HRGMv2_4424_66_7 6327 8786 - GH3
CAZyme HRGMv2_4424_66 HRGMv2_4424_66_8 8787 11087 - GH2
CAZyme HRGMv2_4424_66 HRGMv2_4424_66_9 11142 12632 - GH43_35
Gene ID: HRGMv2_4424_66_2
Type: CAZyme
Location: 435 - 1445 (+)
Gene ID: HRGMv2_4424_66_3
Type: CAZyme
Location: 1462 - 3027 (+)
Gene ID: HRGMv2_4424_66_4
Type: CAZyme
Location: 3056 - 3865 (-)
Gene ID: HRGMv2_4424_66_5
Type: TC
Location: 3862 - 4551 (-)
Gene ID: HRGMv2_4424_66_6
Type: TC
Location: 4597 - 6303 (-)
Gene ID: HRGMv2_4424_66_7
Type: CAZyme
Location: 6327 - 8786 (-)
Gene ID: HRGMv2_4424_66_8
Type: CAZyme
Location: 8787 - 11087 (-)
Gene ID: HRGMv2_4424_66_9
Type: CAZyme
Location: 11142 - 12632 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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