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Cluster: HRGMv2_4424_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4424_6 HRGMv2_4424_6_18 13534 14607 - GT2
TC HRGMv2_4424_6 HRGMv2_4424_6_19 14635 16170 - 2.A.66.1.40
pfam HRGMv2_4424_6 HRGMv2_4424_6_20 16249 17499 - DUF4832 | DUF4874
CAZyme HRGMv2_4424_6 HRGMv2_4424_6_21 17474 18250 - GT2
CAZyme HRGMv2_4424_6 HRGMv2_4424_6_22 18301 19539 - GT4
pfam HRGMv2_4424_6 HRGMv2_4424_6_23 19553 19942 - DUF2304
pfam HRGMv2_4424_6 HRGMv2_4424_6_24 19966 21438 - PelG
CAZyme HRGMv2_4424_6 HRGMv2_4424_6_25 21502 23007 - GT4
Gene ID: HRGMv2_4424_6_18
Type: CAZyme
Location: 13534 - 14607 (-)
Gene ID: HRGMv2_4424_6_19
Type: TC
Location: 14635 - 16170 (-)
Gene ID: HRGMv2_4424_6_20
Type: pfam
Location: 16249 - 17499 (-)
Gene ID: HRGMv2_4424_6_21
Type: CAZyme
Location: 17474 - 18250 (-)
Gene ID: HRGMv2_4424_6_22
Type: CAZyme
Location: 18301 - 19539 (-)
Gene ID: HRGMv2_4424_6_23
Type: pfam
Location: 19553 - 19942 (-)
Gene ID: HRGMv2_4424_6_24
Type: pfam
Location: 19966 - 21438 (-)
Gene ID: HRGMv2_4424_6_25
Type: CAZyme
Location: 21502 - 23007 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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