Cluster: HRGMv2_4424_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4424
- CGC Family ID: CGCFAM_10614
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4424_60 | HRGMv2_4424_60_10 | 5939 | 7072 | - | 4.A.1.2.2 |
| pfam | HRGMv2_4424_60 | HRGMv2_4424_60_11 | 7069 | 7842 | - | Radical_SAM |
| pfam | HRGMv2_4424_60 | HRGMv2_4424_60_12 | 7981 | 8262 | - | DUF6171 |
| CAZyme | HRGMv2_4424_60 | HRGMv2_4424_60_13 | 8298 | 9764 | - | GH51_1 |
| CAZyme | HRGMv2_4424_60 | HRGMv2_4424_60_14 | 10066 | 10884 | - | GH16_3 |
Gene ID: HRGMv2_4424_60_10
Type: TC
Location: 5939 - 7072 (-)
Type: TC
Location: 5939 - 7072 (-)
Gene ID: HRGMv2_4424_60_11
Type: pfam
Location: 7069 - 7842 (-)
Type: pfam
Location: 7069 - 7842 (-)
Gene ID: HRGMv2_4424_60_12
Type: pfam
Location: 7981 - 8262 (-)
Type: pfam
Location: 7981 - 8262 (-)
Gene ID: HRGMv2_4424_60_13
Type: CAZyme
Location: 8298 - 9764 (-)
Type: CAZyme
Location: 8298 - 9764 (-)
Gene ID: HRGMv2_4424_60_14
Type: CAZyme
Location: 10066 - 10884 (-)
Type: CAZyme
Location: 10066 - 10884 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp937942105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.