Cluster: HRGMv2_4424_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4424
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4424_39 | HRGMv2_4424_39_10 | 6897 | 7859 | + | 2.A.19.5.3 |
| CAZyme | HRGMv2_4424_39 | HRGMv2_4424_39_11 | 7927 | 9939 | + | CBM67 | GH78 |
| TC | HRGMv2_4424_39 | HRGMv2_4424_39_12 | 10071 | 10784 | + | 3.A.1.147.6 |
| TC | HRGMv2_4424_39 | HRGMv2_4424_39_13 | 10806 | 12395 | + | 3.A.1.147.6 |
Gene ID: HRGMv2_4424_39_10
Type: TC
Location: 6897 - 7859 (+)
Type: TC
Location: 6897 - 7859 (+)
Gene ID: HRGMv2_4424_39_11
Type: CAZyme
Location: 7927 - 9939 (+)
Type: CAZyme
Location: 7927 - 9939 (+)
Gene ID: HRGMv2_4424_39_12
Type: TC
Location: 10071 - 10784 (+)
Type: TC
Location: 10071 - 10784 (+)
Gene ID: HRGMv2_4424_39_13
Type: TC
Location: 10806 - 12395 (+)
Type: TC
Location: 10806 - 12395 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp937942105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.