Cluster: HRGMv2_4424_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4424
- CGC Family ID: CGCFAM_02055
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4424_37 | HRGMv2_4424_37_6 | 4182 | 6104 | - | 3.A.1.111.2 |
| TC | HRGMv2_4424_37 | HRGMv2_4424_37_7 | 6097 | 7971 | - | 3.A.1.111.2 |
| STP | HRGMv2_4424_37 | HRGMv2_4424_37_8 | 8061 | 8747 | - | HATPase_c |
| TF | HRGMv2_4424_37 | HRGMv2_4424_37_9 | 8758 | 9453 | - | LytTR |
| CAZyme | HRGMv2_4424_37 | HRGMv2_4424_37_10 | 9656 | 13006 | - | GH2 |
| CAZyme | HRGMv2_4424_37 | HRGMv2_4424_37_11 | 13037 | 14167 | - | GH5_4 |
Gene ID: HRGMv2_4424_37_6
Type: TC
Location: 4182 - 6104 (-)
Type: TC
Location: 4182 - 6104 (-)
Gene ID: HRGMv2_4424_37_7
Type: TC
Location: 6097 - 7971 (-)
Type: TC
Location: 6097 - 7971 (-)
Gene ID: HRGMv2_4424_37_8
Type: STP
Location: 8061 - 8747 (-)
Type: STP
Location: 8061 - 8747 (-)
Gene ID: HRGMv2_4424_37_9
Type: TF
Location: 8758 - 9453 (-)
Type: TF
Location: 8758 - 9453 (-)
Gene ID: HRGMv2_4424_37_10
Type: CAZyme
Location: 9656 - 13006 (-)
Type: CAZyme
Location: 9656 - 13006 (-)
Gene ID: HRGMv2_4424_37_11
Type: CAZyme
Location: 13037 - 14167 (-)
Type: CAZyme
Location: 13037 - 14167 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp937942105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.