Cluster: HRGMv2_4424_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4424
- CGC Family ID: CGCFAM_03378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4424_35 | HRGMv2_4424_35_3 | 2322 | 3797 | + | GH29 |
| pfam | HRGMv2_4424_35 | HRGMv2_4424_35_4 | 3836 | 4276 | + | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | HRGMv2_4424_35 | HRGMv2_4424_35_5 | 4333 | 4893 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| TC | HRGMv2_4424_35 | HRGMv2_4424_35_6 | 4911 | 6281 | - | 2.A.66.1.32 |
Gene ID: HRGMv2_4424_35_3
Type: CAZyme
Location: 2322 - 3797 (+)
Type: CAZyme
Location: 2322 - 3797 (+)
Gene ID: HRGMv2_4424_35_4
Type: pfam
Location: 3836 - 4276 (+)
Type: pfam
Location: 3836 - 4276 (+)
Gene ID: HRGMv2_4424_35_5
Type: pfam
Location: 4333 - 4893 (-)
Type: pfam
Location: 4333 - 4893 (-)
Gene ID: HRGMv2_4424_35_6
Type: TC
Location: 4911 - 6281 (-)
Type: TC
Location: 4911 - 6281 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp937942105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.