Cluster: HRGMv2_4424_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4424
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4424_34 | HRGMv2_4424_34_2 | 1603 | 4548 | - | 3.A.1.122.2 |
| TC | HRGMv2_4424_34 | HRGMv2_4424_34_3 | 4877 | 5665 | + | 3.A.1.3.23 |
| TC | HRGMv2_4424_34 | HRGMv2_4424_34_4 | 5788 | 6489 | + | 3.A.1.3.20 |
| TC | HRGMv2_4424_34 | HRGMv2_4424_34_5 | 6476 | 7198 | + | 3.A.1.3.25 |
| CAZyme | HRGMv2_4424_34 | HRGMv2_4424_34_6 | 7416 | 8576 | + | GH27 |
Gene ID: HRGMv2_4424_34_2
Type: TC
Location: 1603 - 4548 (-)
Type: TC
Location: 1603 - 4548 (-)
Gene ID: HRGMv2_4424_34_3
Type: TC
Location: 4877 - 5665 (+)
Type: TC
Location: 4877 - 5665 (+)
Gene ID: HRGMv2_4424_34_4
Type: TC
Location: 5788 - 6489 (+)
Type: TC
Location: 5788 - 6489 (+)
Gene ID: HRGMv2_4424_34_5
Type: TC
Location: 6476 - 7198 (+)
Type: TC
Location: 6476 - 7198 (+)
Gene ID: HRGMv2_4424_34_6
Type: CAZyme
Location: 7416 - 8576 (+)
Type: CAZyme
Location: 7416 - 8576 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp937942105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.