Cluster: HRGMv2_4423_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4423
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4423_14 | HRGMv2_4423_14_9 | 7140 | 8063 | + | 3.A.1.105.3 |
| pfam | HRGMv2_4423_14 | HRGMv2_4423_14_10 | 8050 | 8958 | + | ABC2_membrane | ABC2_membrane_3 |
| pfam | HRGMv2_4423_14 | HRGMv2_4423_14_11 | 9133 | 10440 | + | Aminotran_5 | DegT_DnrJ_EryC1 |
| CAZyme | HRGMv2_4423_14 | HRGMv2_4423_14_12 | 10462 | 11511 | + | GH179 |
Gene ID: HRGMv2_4423_14_9
Type: TC
Location: 7140 - 8063 (+)
Type: TC
Location: 7140 - 8063 (+)
Gene ID: HRGMv2_4423_14_10
Type: pfam
Location: 8050 - 8958 (+)
Type: pfam
Location: 8050 - 8958 (+)
Gene ID: HRGMv2_4423_14_11
Type: pfam
Location: 9133 - 10440 (+)
Type: pfam
Location: 9133 - 10440 (+)
Gene ID: HRGMv2_4423_14_12
Type: CAZyme
Location: 10462 - 11511 (+)
Type: CAZyme
Location: 10462 - 11511 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
SFWF01
Species
SFWF01 sp949293385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.