Cluster: HRGMv2_4423_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4423
- CGC Family ID: CGCFAM_00987
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4423_148 | HRGMv2_4423_148_2 | 247 | 852 | - | 3.D.6.1.2 |
| TC | HRGMv2_4423_148 | HRGMv2_4423_148_3 | 852 | 1553 | - | 3.D.6.1.2 |
| pfam | HRGMv2_4423_148 | HRGMv2_4423_148_4 | 1555 | 2811 | - | FMN_bind | FMN_bind |
| TC | HRGMv2_4423_148 | HRGMv2_4423_148_5 | 2808 | 3770 | - | 3.D.6.1.2 |
| TC | HRGMv2_4423_148 | HRGMv2_4423_148_6 | 3770 | 5089 | - | 3.D.6.1.2 |
| CAZyme | HRGMv2_4423_148 | HRGMv2_4423_148_7 | 5264 | 6019 | + | CE4 |
Gene ID: HRGMv2_4423_148_2
Type: TC
Location: 247 - 852 (-)
Type: TC
Location: 247 - 852 (-)
Gene ID: HRGMv2_4423_148_3
Type: TC
Location: 852 - 1553 (-)
Type: TC
Location: 852 - 1553 (-)
Gene ID: HRGMv2_4423_148_4
Type: pfam
Location: 1555 - 2811 (-)
Type: pfam
Location: 1555 - 2811 (-)
Gene ID: HRGMv2_4423_148_5
Type: TC
Location: 2808 - 3770 (-)
Type: TC
Location: 2808 - 3770 (-)
Gene ID: HRGMv2_4423_148_6
Type: TC
Location: 3770 - 5089 (-)
Type: TC
Location: 3770 - 5089 (-)
Gene ID: HRGMv2_4423_148_7
Type: CAZyme
Location: 5264 - 6019 (+)
Type: CAZyme
Location: 5264 - 6019 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
SFWF01
Species
SFWF01 sp949293385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.