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Cluster: HRGMv2_4423_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4423_60 HRGMv2_4423_60_1 203 1567 - 2.A.66.1.13
TC HRGMv2_4423_60 HRGMv2_4423_60_2 1671 2429 + 2.A.5.5.2
NULL(UNKNOWN) HRGMv2_4423_60 HRGMv2_4423_60_3 2512 2907 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4423_60 HRGMv2_4423_60_4 3006 3911 + AP_endonuc_2
CAZyme HRGMv2_4423_60 HRGMv2_4423_60_5 4301 5257 - GT2
pfam HRGMv2_4423_60 HRGMv2_4423_60_6 5272 6057 - TatD_DNase
pfam HRGMv2_4423_60 HRGMv2_4423_60_7 6057 7976 - tRNA-synt_1 | tRNA-synt_1 | tRNA_bind | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Anticodon_3
TC HRGMv2_4423_60 HRGMv2_4423_60_8 7963 9168 - 9.B.67.1.2
Gene ID: HRGMv2_4423_60_1
Type: TC
Location: 203 - 1567 (-)
Gene ID: HRGMv2_4423_60_2
Type: TC
Location: 1671 - 2429 (+)
Gene ID: HRGMv2_4423_60_3
Type:
Location: 2512 - 2907 (+)
Gene ID: HRGMv2_4423_60_4
Type: pfam
Location: 3006 - 3911 (+)
Gene ID: HRGMv2_4423_60_5
Type: CAZyme
Location: 4301 - 5257 (-)
Gene ID: HRGMv2_4423_60_6
Type: pfam
Location: 5272 - 6057 (-)
Gene ID: HRGMv2_4423_60_7
Type: pfam
Location: 6057 - 7976 (-)
Gene ID: HRGMv2_4423_60_8
Type: TC
Location: 7963 - 9168 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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