Cluster: HRGMv2_4422_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4422
- CGC Family ID: CGCFAM_00207
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4422_3 | HRGMv2_4422_3_84 | 84772 | 86991 | + | GH78 |
| pfam | HRGMv2_4422_3 | HRGMv2_4422_3_85 | 86988 | 87893 | + | Fer4_16 |
| TC | HRGMv2_4422_3 | HRGMv2_4422_3_86 | 88354 | 89202 | + | 3.A.1.24.5 |
| TC | HRGMv2_4422_3 | HRGMv2_4422_3_87 | 89261 | 90271 | + | 3.A.1.24.2 |
| TC | HRGMv2_4422_3 | HRGMv2_4422_3_88 | 90261 | 90965 | + | 3.A.1.24.5 |
Gene ID: HRGMv2_4422_3_84
Type: CAZyme
Location: 84772 - 86991 (+)
Type: CAZyme
Location: 84772 - 86991 (+)
Gene ID: HRGMv2_4422_3_85
Type: pfam
Location: 86988 - 87893 (+)
Type: pfam
Location: 86988 - 87893 (+)
Gene ID: HRGMv2_4422_3_86
Type: TC
Location: 88354 - 89202 (+)
Type: TC
Location: 88354 - 89202 (+)
Gene ID: HRGMv2_4422_3_87
Type: TC
Location: 89261 - 90271 (+)
Type: TC
Location: 89261 - 90271 (+)
Gene ID: HRGMv2_4422_3_88
Type: TC
Location: 90261 - 90965 (+)
Type: TC
Location: 90261 - 90965 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.