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Cluster: HRGMv2_4422_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4422_32 HRGMv2_4422_32_3 3924 4664 - GT26
pfam HRGMv2_4422_32 HRGMv2_4422_32_4 4763 5227 + RNase_H
STP HRGMv2_4422_32 HRGMv2_4422_32_5 5810 8977 + SBP_bac_1
TC HRGMv2_4422_32 HRGMv2_4422_32_6 9056 10009 + 3.A.1.1.11
TC HRGMv2_4422_32 HRGMv2_4422_32_7 10011 10883 + 3.A.1.1.20
pfam HRGMv2_4422_32 HRGMv2_4422_32_8 10896 13070 + NHL | Yip1
pfam HRGMv2_4422_32 HRGMv2_4422_32_9 13088 16054 + DUF5696
TC HRGMv2_4422_32 HRGMv2_4422_32_10 16062 17033 + 3.A.1.1.11
TC HRGMv2_4422_32 HRGMv2_4422_32_11 17051 18085 + 3.A.1.1.39
Gene ID: HRGMv2_4422_32_3
Type: CAZyme
Location: 3924 - 4664 (-)
Gene ID: HRGMv2_4422_32_4
Type: pfam
Location: 4763 - 5227 (+)
Gene ID: HRGMv2_4422_32_5
Type: STP
Location: 5810 - 8977 (+)
Gene ID: HRGMv2_4422_32_6
Type: TC
Location: 9056 - 10009 (+)
Gene ID: HRGMv2_4422_32_7
Type: TC
Location: 10011 - 10883 (+)
Gene ID: HRGMv2_4422_32_8
Type: pfam
Location: 10896 - 13070 (+)
Gene ID: HRGMv2_4422_32_9
Type: pfam
Location: 13088 - 16054 (+)
Gene ID: HRGMv2_4422_32_10
Type: TC
Location: 16062 - 17033 (+)
Gene ID: HRGMv2_4422_32_11
Type: TC
Location: 17051 - 18085 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS1225
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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