Cluster: HRGMv2_4422_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4422
- CGC Family ID: CGCFAM_10613
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4422_30 | HRGMv2_4422_30_2 | 746 | 1627 | + | GH25 |
| pfam | HRGMv2_4422_30 | HRGMv2_4422_30_3 | 1916 | 2647 | - | ABC_tran | AAA_21 | AAA_23 |
| pfam | HRGMv2_4422_30 | HRGMv2_4422_30_4 | 2644 | 2997 | - | 23S_rRNA_IVP |
| TC | HRGMv2_4422_30 | HRGMv2_4422_30_5 | 4589 | 5206 | + | 2.A.87.1.2 |
Gene ID: HRGMv2_4422_30_2
Type: CAZyme
Location: 746 - 1627 (+)
Type: CAZyme
Location: 746 - 1627 (+)
Gene ID: HRGMv2_4422_30_3
Type: pfam
Location: 1916 - 2647 (-)
Type: pfam
Location: 1916 - 2647 (-)
Gene ID: HRGMv2_4422_30_4
Type: pfam
Location: 2644 - 2997 (-)
Type: pfam
Location: 2644 - 2997 (-)
Gene ID: HRGMv2_4422_30_5
Type: TC
Location: 4589 - 5206 (+)
Type: TC
Location: 4589 - 5206 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.