Cluster: HRGMv2_4422_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4422
- CGC Family ID: CGCFAM_00802
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4422_25 | HRGMv2_4422_25_9 | 6915 | 7823 | - | 3.A.5.1.1 |
| pfam | HRGMv2_4422_25 | HRGMv2_4422_25_10 | 7863 | 11456 | - | SMC_N | SMC_hinge | AAA_15 | AAA_23 | AAA_29 |
| pfam | HRGMv2_4422_25 | HRGMv2_4422_25_11 | 11705 | 12403 | - | PseudoU_synth_2 |
| CAZyme | HRGMv2_4422_25 | HRGMv2_4422_25_12 | 12418 | 13329 | - | CE4 |
Gene ID: HRGMv2_4422_25_9
Type: TC
Location: 6915 - 7823 (-)
Type: TC
Location: 6915 - 7823 (-)
Gene ID: HRGMv2_4422_25_10
Type: pfam
Location: 7863 - 11456 (-)
Type: pfam
Location: 7863 - 11456 (-)
Gene ID: HRGMv2_4422_25_11
Type: pfam
Location: 11705 - 12403 (-)
Type: pfam
Location: 11705 - 12403 (-)
Gene ID: HRGMv2_4422_25_12
Type: CAZyme
Location: 12418 - 13329 (-)
Type: CAZyme
Location: 12418 - 13329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.