Cluster: HRGMv2_4422_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4422
- CGC Family ID: CGCFAM_05373
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4422_21 | HRGMv2_4422_21_18 | 15701 | 17956 | + | 3.A.11.1.1 |
| pfam | HRGMv2_4422_21 | HRGMv2_4422_21_19 | 18037 | 21009 | + | DUF3131 |
| CAZyme | HRGMv2_4422_21 | HRGMv2_4422_21_20 | 20991 | 25268 | + | GH94 | GT84 |
Gene ID: HRGMv2_4422_21_18
Type: TC
Location: 15701 - 17956 (+)
Type: TC
Location: 15701 - 17956 (+)
Gene ID: HRGMv2_4422_21_19
Type: pfam
Location: 18037 - 21009 (+)
Type: pfam
Location: 18037 - 21009 (+)
Gene ID: HRGMv2_4422_21_20
Type: CAZyme
Location: 20991 - 25268 (+)
Type: CAZyme
Location: 20991 - 25268 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.