Cluster: HRGMv2_4422_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4422
- CGC Family ID: CGCFAM_03286
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4422_10 | HRGMv2_4422_10_27 | 28360 | 29967 | + | GH32 |
| NULL(UNKNOWN) | HRGMv2_4422_10 | HRGMv2_4422_10_28 | 29916 | 30509 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4422_10 | HRGMv2_4422_10_29 | 30484 | 31725 | - | ABC2_membrane_3 |
| TC | HRGMv2_4422_10 | HRGMv2_4422_10_30 | 31739 | 32629 | - | 3.A.1.105.9 |
Gene ID: HRGMv2_4422_10_27
Type: CAZyme
Location: 28360 - 29967 (+)
Type: CAZyme
Location: 28360 - 29967 (+)
Gene ID: HRGMv2_4422_10_28
Type:
Location: 29916 - 30509 (+)
Type:
Location: 29916 - 30509 (+)
Gene ID: HRGMv2_4422_10_29
Type: pfam
Location: 30484 - 31725 (-)
Type: pfam
Location: 30484 - 31725 (-)
Gene ID: HRGMv2_4422_10_30
Type: TC
Location: 31739 - 32629 (-)
Type: TC
Location: 31739 - 32629 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.