Cluster: HRGMv2_4422_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4422
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4422_1 | HRGMv2_4422_1_80 | 88342 | 90843 | + | 4.C.1.1.7 |
| pfam | HRGMv2_4422_1 | HRGMv2_4422_1_81 | 90925 | 91803 | + | DAGK_cat | YegS_C |
| pfam | HRGMv2_4422_1 | HRGMv2_4422_1_82 | 91832 | 92704 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_4422_1 | HRGMv2_4422_1_83 | 92796 | 95042 | - | GH65 |
Gene ID: HRGMv2_4422_1_80
Type: TC
Location: 88342 - 90843 (+)
Type: TC
Location: 88342 - 90843 (+)
Gene ID: HRGMv2_4422_1_81
Type: pfam
Location: 90925 - 91803 (+)
Type: pfam
Location: 90925 - 91803 (+)
Gene ID: HRGMv2_4422_1_82
Type: pfam
Location: 91832 - 92704 (+)
Type: pfam
Location: 91832 - 92704 (+)
Gene ID: HRGMv2_4422_1_83
Type: CAZyme
Location: 92796 - 95042 (-)
Type: CAZyme
Location: 92796 - 95042 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.