Cluster: HRGMv2_4421_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4421
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4421_6 | HRGMv2_4421_6_29 | 28885 | 30132 | + | GT2 |
| pfam | HRGMv2_4421_6 | HRGMv2_4421_6_30 | 30223 | 31944 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| TC | HRGMv2_4421_6 | HRGMv2_4421_6_31 | 32302 | 33936 | + | 3.A.1.5.41 |
| STP | HRGMv2_4421_6 | HRGMv2_4421_6_32 | 34022 | 35122 | - | Pyr_redox |
| pfam | HRGMv2_4421_6 | HRGMv2_4421_6_33 | 35142 | 36188 | - | NAD_Gly3P_dh_N | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact |
| CAZyme | HRGMv2_4421_6 | HRGMv2_4421_6_34 | 36227 | 37381 | - | GT4 |
Gene ID: HRGMv2_4421_6_29
Type: CAZyme
Location: 28885 - 30132 (+)
Type: CAZyme
Location: 28885 - 30132 (+)
Gene ID: HRGMv2_4421_6_30
Type: pfam
Location: 30223 - 31944 (-)
Type: pfam
Location: 30223 - 31944 (-)
Gene ID: HRGMv2_4421_6_31
Type: TC
Location: 32302 - 33936 (+)
Type: TC
Location: 32302 - 33936 (+)
Gene ID: HRGMv2_4421_6_32
Type: STP
Location: 34022 - 35122 (-)
Type: STP
Location: 34022 - 35122 (-)
Gene ID: HRGMv2_4421_6_33
Type: pfam
Location: 35142 - 36188 (-)
Type: pfam
Location: 35142 - 36188 (-)
Gene ID: HRGMv2_4421_6_34
Type: CAZyme
Location: 36227 - 37381 (-)
Type: CAZyme
Location: 36227 - 37381 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp002437905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.