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Cluster: HRGMv2_4421_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4421_6 HRGMv2_4421_6_7 6281 8242 - 9.B.18.2.1
pfam HRGMv2_4421_6 HRGMv2_4421_6_8 8303 9028 - CpsB_CapC
TC HRGMv2_4421_6 HRGMv2_4421_6_9 9028 9762 - 8.A.3.3.4
pfam HRGMv2_4421_6 HRGMv2_4421_6_10 9755 10474 - Wzz
pfam HRGMv2_4421_6 HRGMv2_4421_6_11 10745 11533 + Metallophos | Metallophos_2
CAZyme HRGMv2_4421_6 HRGMv2_4421_6_12 11571 13103 + GH77
TC HRGMv2_4421_6 HRGMv2_4421_6_13 13219 14556 + 3.A.1.1.45
Gene ID: HRGMv2_4421_6_7
Type: TC
Location: 6281 - 8242 (-)
Gene ID: HRGMv2_4421_6_8
Type: pfam
Location: 8303 - 9028 (-)
Gene ID: HRGMv2_4421_6_9
Type: TC
Location: 9028 - 9762 (-)
Gene ID: HRGMv2_4421_6_10
Type: pfam
Location: 9755 - 10474 (-)
Gene ID: HRGMv2_4421_6_11
Type: pfam
Location: 10745 - 11533 (+)
Gene ID: HRGMv2_4421_6_12
Type: CAZyme
Location: 11571 - 13103 (+)
Gene ID: HRGMv2_4421_6_13
Type: TC
Location: 13219 - 14556 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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