Cluster: HRGMv2_4421_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4421
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4421_5 | HRGMv2_4421_5_67 | 65575 | 66852 | - | GH18 |
| STP | HRGMv2_4421_5 | HRGMv2_4421_5_68 | 67006 | 67659 | - | NTP_transf_2 |
| CAZyme | HRGMv2_4421_5 | HRGMv2_4421_5_69 | 67646 | 68623 | - | GT2 |
| pfam | HRGMv2_4421_5 | HRGMv2_4421_5_70 | 68674 | 69540 | - | MS_channel_2nd | MS_channel_1st |
| TC | HRGMv2_4421_5 | HRGMv2_4421_5_71 | 69723 | 71291 | + | 2.A.21.2.2 |
Gene ID: HRGMv2_4421_5_67
Type: CAZyme
Location: 65575 - 66852 (-)
Type: CAZyme
Location: 65575 - 66852 (-)
Gene ID: HRGMv2_4421_5_68
Type: STP
Location: 67006 - 67659 (-)
Type: STP
Location: 67006 - 67659 (-)
Gene ID: HRGMv2_4421_5_69
Type: CAZyme
Location: 67646 - 68623 (-)
Type: CAZyme
Location: 67646 - 68623 (-)
Gene ID: HRGMv2_4421_5_70
Type: pfam
Location: 68674 - 69540 (-)
Type: pfam
Location: 68674 - 69540 (-)
Gene ID: HRGMv2_4421_5_71
Type: TC
Location: 69723 - 71291 (+)
Type: TC
Location: 69723 - 71291 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp002437905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.