Cluster: HRGMv2_4421_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4421
- CGC Family ID: CGCFAM_00382
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4421_23 | HRGMv2_4421_23_12 | 11405 | 12274 | + | 3.A.1.3.20 |
| TC | HRGMv2_4421_23 | HRGMv2_4421_23_13 | 12287 | 13051 | + | 3.A.1.3.20 |
| TC | HRGMv2_4421_23 | HRGMv2_4421_23_14 | 13055 | 13813 | + | 3.A.1.3.20 |
| pfam | HRGMv2_4421_23 | HRGMv2_4421_23_15 | 13871 | 14743 | - | LicD |
| TC | HRGMv2_4421_23 | HRGMv2_4421_23_16 | 14740 | 16224 | - | 2.A.66.2.16 |
| CAZyme | HRGMv2_4421_23 | HRGMv2_4421_23_17 | 16322 | 17239 | - | GT2 |
Gene ID: HRGMv2_4421_23_12
Type: TC
Location: 11405 - 12274 (+)
Type: TC
Location: 11405 - 12274 (+)
Gene ID: HRGMv2_4421_23_13
Type: TC
Location: 12287 - 13051 (+)
Type: TC
Location: 12287 - 13051 (+)
Gene ID: HRGMv2_4421_23_14
Type: TC
Location: 13055 - 13813 (+)
Type: TC
Location: 13055 - 13813 (+)
Gene ID: HRGMv2_4421_23_15
Type: pfam
Location: 13871 - 14743 (-)
Type: pfam
Location: 13871 - 14743 (-)
Gene ID: HRGMv2_4421_23_16
Type: TC
Location: 14740 - 16224 (-)
Type: TC
Location: 14740 - 16224 (-)
Gene ID: HRGMv2_4421_23_17
Type: CAZyme
Location: 16322 - 17239 (-)
Type: CAZyme
Location: 16322 - 17239 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp002437905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.