Cluster: HRGMv2_4421_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4421
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4421_21 | HRGMv2_4421_21_31 | 31270 | 32628 | + | 9.A.40.1.2 |
| pfam | HRGMv2_4421_21 | HRGMv2_4421_21_32 | 32695 | 33339 | + | QueH |
| pfam | HRGMv2_4421_21 | HRGMv2_4421_21_33 | 33363 | 34118 | + | DUF34_NIF3 |
| CAZyme | HRGMv2_4421_21 | HRGMv2_4421_21_34 | 34142 | 36493 | + | GH2 |
Gene ID: HRGMv2_4421_21_31
Type: TC
Location: 31270 - 32628 (+)
Type: TC
Location: 31270 - 32628 (+)
Gene ID: HRGMv2_4421_21_32
Type: pfam
Location: 32695 - 33339 (+)
Type: pfam
Location: 32695 - 33339 (+)
Gene ID: HRGMv2_4421_21_33
Type: pfam
Location: 33363 - 34118 (+)
Type: pfam
Location: 33363 - 34118 (+)
Gene ID: HRGMv2_4421_21_34
Type: CAZyme
Location: 34142 - 36493 (+)
Type: CAZyme
Location: 34142 - 36493 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp002437905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.