Cluster: HRGMv2_4421_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4421
- CGC Family ID: CGCFAM_00153
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4421_21 | HRGMv2_4421_21_14 | 14377 | 15495 | + | 3.A.1.4.10 |
| TC | HRGMv2_4421_21 | HRGMv2_4421_21_15 | 15724 | 16587 | + | 3.A.1.4.10 |
| TC | HRGMv2_4421_21 | HRGMv2_4421_21_16 | 16591 | 17745 | + | 3.A.1.4.10 |
| TC | HRGMv2_4421_21 | HRGMv2_4421_21_17 | 17738 | 18508 | + | 3.A.1.4.10 |
| TC | HRGMv2_4421_21 | HRGMv2_4421_21_18 | 18514 | 19224 | + | 3.A.1.4.10 |
| CAZyme | HRGMv2_4421_21 | HRGMv2_4421_21_19 | 19293 | 20885 | - | GH20 |
Gene ID: HRGMv2_4421_21_14
Type: TC
Location: 14377 - 15495 (+)
Type: TC
Location: 14377 - 15495 (+)
Gene ID: HRGMv2_4421_21_15
Type: TC
Location: 15724 - 16587 (+)
Type: TC
Location: 15724 - 16587 (+)
Gene ID: HRGMv2_4421_21_16
Type: TC
Location: 16591 - 17745 (+)
Type: TC
Location: 16591 - 17745 (+)
Gene ID: HRGMv2_4421_21_17
Type: TC
Location: 17738 - 18508 (+)
Type: TC
Location: 17738 - 18508 (+)
Gene ID: HRGMv2_4421_21_18
Type: TC
Location: 18514 - 19224 (+)
Type: TC
Location: 18514 - 19224 (+)
Gene ID: HRGMv2_4421_21_19
Type: CAZyme
Location: 19293 - 20885 (-)
Type: CAZyme
Location: 19293 - 20885 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp002437905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.