Cluster: HRGMv2_4421_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4421
- CGC Family ID: CGCFAM_03154
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4421_17 | HRGMv2_4421_17_41 | 44943 | 46373 | + | 3.B.1.1.1 |
| pfam | HRGMv2_4421_17 | HRGMv2_4421_17_42 | 46469 | 48958 | + | UvrD-helicase | UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor |
| pfam | HRGMv2_4421_17 | HRGMv2_4421_17_43 | 49033 | 49869 | - | Lactamase_B |
| CAZyme | HRGMv2_4421_17 | HRGMv2_4421_17_44 | 50087 | 52270 | + | GH36 |
Gene ID: HRGMv2_4421_17_41
Type: TC
Location: 44943 - 46373 (+)
Type: TC
Location: 44943 - 46373 (+)
Gene ID: HRGMv2_4421_17_42
Type: pfam
Location: 46469 - 48958 (+)
Type: pfam
Location: 46469 - 48958 (+)
Gene ID: HRGMv2_4421_17_43
Type: pfam
Location: 49033 - 49869 (-)
Type: pfam
Location: 49033 - 49869 (-)
Gene ID: HRGMv2_4421_17_44
Type: CAZyme
Location: 50087 - 52270 (+)
Type: CAZyme
Location: 50087 - 52270 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp002437905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.