Cluster: HRGMv2_4421_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4421
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4421_17 | HRGMv2_4421_17_29 | 29989 | 30627 | + | 2.A.115.2.14 |
| TC | HRGMv2_4421_17 | HRGMv2_4421_17_30 | 30715 | 33726 | - | 3.A.1.122.13 |
| NULL(UNKNOWN) | HRGMv2_4421_17 | HRGMv2_4421_17_31 | 33907 | 34110 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_4421_17 | HRGMv2_4421_17_32 | 34280 | 35536 | + | S55.001 |
| CAZyme | HRGMv2_4421_17 | HRGMv2_4421_17_33 | 35974 | 37251 | - | GH28 |
Gene ID: HRGMv2_4421_17_29
Type: TC
Location: 29989 - 30627 (+)
Type: TC
Location: 29989 - 30627 (+)
Gene ID: HRGMv2_4421_17_30
Type: TC
Location: 30715 - 33726 (-)
Type: TC
Location: 30715 - 33726 (-)
Gene ID: HRGMv2_4421_17_31
Type:
Location: 33907 - 34110 (+)
Type:
Location: 33907 - 34110 (+)
Gene ID: HRGMv2_4421_17_32
Type: peptidase
Location: 34280 - 35536 (+)
Type: peptidase
Location: 34280 - 35536 (+)
Gene ID: HRGMv2_4421_17_33
Type: CAZyme
Location: 35974 - 37251 (-)
Type: CAZyme
Location: 35974 - 37251 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp002437905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.