Cluster: HRGMv2_4421_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4421
- CGC Family ID: CGCFAM_05560
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4421_15 | HRGMv2_4421_15_42 | 42109 | 43263 | + | GT4 |
| pfam | HRGMv2_4421_15 | HRGMv2_4421_15_43 | 43260 | 44096 | + | Cu-oxidase_4 |
| TC | HRGMv2_4421_15 | HRGMv2_4421_15_44 | 44152 | 45558 | + | 9.A.11.1.1 |
| NULL(UNKNOWN) | HRGMv2_4421_15 | HRGMv2_4421_15_45 | 45643 | 45987 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4421_15 | HRGMv2_4421_15_46 | 46012 | 48231 | + | 3.A.7.16.1 |
| pfam | HRGMv2_4421_15 | HRGMv2_4421_15_47 | 48228 | 48935 | + | Pribosyltran | DZR_2 |
| TC | HRGMv2_4421_15 | HRGMv2_4421_15_48 | 49043 | 50083 | + | 1.A.33.1.5 |
Gene ID: HRGMv2_4421_15_42
Type: CAZyme
Location: 42109 - 43263 (+)
Type: CAZyme
Location: 42109 - 43263 (+)
Gene ID: HRGMv2_4421_15_43
Type: pfam
Location: 43260 - 44096 (+)
Type: pfam
Location: 43260 - 44096 (+)
Gene ID: HRGMv2_4421_15_44
Type: TC
Location: 44152 - 45558 (+)
Type: TC
Location: 44152 - 45558 (+)
Gene ID: HRGMv2_4421_15_45
Type:
Location: 45643 - 45987 (+)
Type:
Location: 45643 - 45987 (+)
Gene ID: HRGMv2_4421_15_46
Type: TC
Location: 46012 - 48231 (+)
Type: TC
Location: 46012 - 48231 (+)
Gene ID: HRGMv2_4421_15_47
Type: pfam
Location: 48228 - 48935 (+)
Type: pfam
Location: 48228 - 48935 (+)
Gene ID: HRGMv2_4421_15_48
Type: TC
Location: 49043 - 50083 (+)
Type: TC
Location: 49043 - 50083 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp002437905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.