Cluster: HRGMv2_4421_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4421
- CGC Family ID: CGCFAM_01983
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4421_14 | HRGMv2_4421_14_19 | 20618 | 21598 | - | 3.A.1.2.17 |
| pfam | HRGMv2_4421_14 | HRGMv2_4421_14_20 | 21600 | 22706 | - | BPD_transp_2 |
| TC | HRGMv2_4421_14 | HRGMv2_4421_14_21 | 22699 | 24231 | - | 3.A.1.2.17 |
| pfam | HRGMv2_4421_14 | HRGMv2_4421_14_22 | 24321 | 25601 | - | Bmp |
| STP | HRGMv2_4421_14 | HRGMv2_4421_14_23 | 25657 | 26235 | - | Pribosyltran |
| TC | HRGMv2_4421_14 | HRGMv2_4421_14_24 | 26553 | 27623 | - | 9.B.97.1.2 |
| CAZyme | HRGMv2_4421_14 | HRGMv2_4421_14_25 | 27905 | 28738 | + | GH16 |
Gene ID: HRGMv2_4421_14_19
Type: TC
Location: 20618 - 21598 (-)
Type: TC
Location: 20618 - 21598 (-)
Gene ID: HRGMv2_4421_14_20
Type: pfam
Location: 21600 - 22706 (-)
Type: pfam
Location: 21600 - 22706 (-)
Gene ID: HRGMv2_4421_14_21
Type: TC
Location: 22699 - 24231 (-)
Type: TC
Location: 22699 - 24231 (-)
Gene ID: HRGMv2_4421_14_22
Type: pfam
Location: 24321 - 25601 (-)
Type: pfam
Location: 24321 - 25601 (-)
Gene ID: HRGMv2_4421_14_23
Type: STP
Location: 25657 - 26235 (-)
Type: STP
Location: 25657 - 26235 (-)
Gene ID: HRGMv2_4421_14_24
Type: TC
Location: 26553 - 27623 (-)
Type: TC
Location: 26553 - 27623 (-)
Gene ID: HRGMv2_4421_14_25
Type: CAZyme
Location: 27905 - 28738 (+)
Type: CAZyme
Location: 27905 - 28738 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp002437905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.