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Cluster: HRGMv2_4421_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4421_1 HRGMv2_4421_1_101 122142 123134 - 8.A.5.1.6
TC HRGMv2_4421_1 HRGMv2_4421_1_102 123150 124112 - 3.A.1.2.8
TC HRGMv2_4421_1 HRGMv2_4421_1_103 124102 125841 - 9.B.33.1.1
TF HRGMv2_4421_1 HRGMv2_4421_1_104 125838 127442 - HTH_AraC
pfam HRGMv2_4421_1 HRGMv2_4421_1_105 127615 127992 - Flg_new
TC HRGMv2_4421_1 HRGMv2_4421_1_106 128019 129104 - 3.A.1.2.3
TC HRGMv2_4421_1 HRGMv2_4421_1_107 129121 130665 - 3.A.1.2.3
TC HRGMv2_4421_1 HRGMv2_4421_1_108 130756 131820 - 3.A.1.2.3
CAZyme HRGMv2_4421_1 HRGMv2_4421_1_109 132108 134813 - GH16
Gene ID: HRGMv2_4421_1_101
Type: TC
Location: 122142 - 123134 (-)
Gene ID: HRGMv2_4421_1_102
Type: TC
Location: 123150 - 124112 (-)
Gene ID: HRGMv2_4421_1_103
Type: TC
Location: 124102 - 125841 (-)
Gene ID: HRGMv2_4421_1_104
Type: TF
Location: 125838 - 127442 (-)
Gene ID: HRGMv2_4421_1_105
Type: pfam
Location: 127615 - 127992 (-)
Gene ID: HRGMv2_4421_1_106
Type: TC
Location: 128019 - 129104 (-)
Gene ID: HRGMv2_4421_1_107
Type: TC
Location: 129121 - 130665 (-)
Gene ID: HRGMv2_4421_1_108
Type: TC
Location: 130756 - 131820 (-)
Gene ID: HRGMv2_4421_1_109
Type: CAZyme
Location: 132108 - 134813 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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