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Cluster: HRGMv2_4421_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4421_14 HRGMv2_4421_14_1 165 1328 - GH179
CAZyme HRGMv2_4421_14 HRGMv2_4421_14_2 1432 2601 - GH179
pfam HRGMv2_4421_14 HRGMv2_4421_14_3 2673 3494 - AP_endonuc_2
TC HRGMv2_4421_14 HRGMv2_4421_14_4 3975 5378 + 2.A.66.1.32
pfam HRGMv2_4421_14 HRGMv2_4421_14_5 5530 6558 + Lipase_GDSL_2 | Lipase_GDSL_3 | GxDLY
TC HRGMv2_4421_14 HRGMv2_4421_14_6 6705 7478 - 3.A.1.34.1
TC HRGMv2_4421_14 HRGMv2_4421_14_7 7475 8401 - 3.A.1.34.1
TC HRGMv2_4421_14 HRGMv2_4421_14_8 8418 9413 - 3.A.1.34.1
TC HRGMv2_4421_14 HRGMv2_4421_14_9 9914 11842 - 3.A.1.120.6
Gene ID: HRGMv2_4421_14_1
Type: CAZyme
Location: 165 - 1328 (-)
Gene ID: HRGMv2_4421_14_2
Type: CAZyme
Location: 1432 - 2601 (-)
Gene ID: HRGMv2_4421_14_3
Type: pfam
Location: 2673 - 3494 (-)
Gene ID: HRGMv2_4421_14_4
Type: TC
Location: 3975 - 5378 (+)
Gene ID: HRGMv2_4421_14_5
Type: pfam
Location: 5530 - 6558 (+)
Gene ID: HRGMv2_4421_14_6
Type: TC
Location: 6705 - 7478 (-)
Gene ID: HRGMv2_4421_14_7
Type: TC
Location: 7475 - 8401 (-)
Gene ID: HRGMv2_4421_14_8
Type: TC
Location: 8418 - 9413 (-)
Gene ID: HRGMv2_4421_14_9
Type: TC
Location: 9914 - 11842 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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