Cluster: HRGMv2_4421_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4421
- CGC Family ID: CGCFAM_01175
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4421_9 | HRGMv2_4421_9_18 | 15681 | 17918 | + | 8.A.59.4.1 |
| NULL(UNKNOWN) | HRGMv2_4421_9 | HRGMv2_4421_9_19 | 17915 | 20980 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4421_9 | HRGMv2_4421_9_20 | 21007 | 22092 | + | HEAT_PBS | HEAT_2 |
| CAZyme | HRGMv2_4421_9 | HRGMv2_4421_9_21 | 22094 | 23506 | + | GT2 |
Gene ID: HRGMv2_4421_9_18
Type: TC
Location: 15681 - 17918 (+)
Type: TC
Location: 15681 - 17918 (+)
Gene ID: HRGMv2_4421_9_19
Type:
Location: 17915 - 20980 (+)
Type:
Location: 17915 - 20980 (+)
Gene ID: HRGMv2_4421_9_20
Type: pfam
Location: 21007 - 22092 (+)
Type: pfam
Location: 21007 - 22092 (+)
Gene ID: HRGMv2_4421_9_21
Type: CAZyme
Location: 22094 - 23506 (+)
Type: CAZyme
Location: 22094 - 23506 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp002437905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.